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BPSL0301 BPSL0301 BPSL1001 BPSL1001 BPSS0224 BPSS0224 silP silP BPSL3378 BPSL3378 rplN rplN BPSS2136 BPSS2136 BPSS0351 BPSS0351 BPSS1981 BPSS1981 BPSS0841 BPSS0841 ppa ppa
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSL0301Putative cheavy metal binding protein; Similar to Salmonella typhimurium putative copper chaperone stm0355 SWALL:Q8ZRG5 (EMBL:AE008711) (64 aa) fasta scores: E(): 5.8e-06, 40.98% id in 61 aa, and to Brucella melitensis heavy metal binding protein bmei1032 SWALL:Q8YGX3 (EMBL:AE009543) (65 aa) fasta scores: E(): 0.00018, 43.07% id in 65 aa. (82 aa)    
Predicted Functional Partners:
BPSL1001
Putative membrane-attached superoxide dismutase; Similar although longer in its N-terminal region than Xanthomonas campestris pv. campestris str. ATCC33913 superoxide dismutase SodC2 SWALL:AAM39510 (EMBL:AE012115) (165 aa) fasta scores: E(): 7.1e-15, 43.44% id in 145 aa, and to Ovis aries superoxide dismutase [Cu-Zn] Sod1 SWALL:SODC_SHEEP (SWALL:P09670) (151 aa) fasta scores: E(): 1.4e-08, 37.03% id in 135 aa.
  
 0.956
BPSS0224
Putative cation-transporting ATPase membrane protein; No significant database matches to the full length CDS. N-terminal region is similar to Similar to Homo sapiens copper-transporting ATPase 2 ATP7B or WND or PWD or WC1 SWALL:AT7B_HUMAN (SWALL:P35670) (1465 aa) fasta scores: E(): 3e-07, 27% id in 300 aa. C-terminal region is similar to Ralstonia solanacearum probable cation-transporting ATPase transmembrane protein rsc3348 or rs02623 SWALL:Q8XU45 (EMBL:AL646074) (748 aa) fasta scores: E(): 1.1e-121, 59.89% id in 768 aa, and to Synechocystis sp. cation-transporting ATPase PacS or sll1 [...]
 
 
 0.882
silP
Similar to Salmonella typhimurium putative cation transporting P-type ATPase SilP SWALL:SILP_SALTY (SWALL:Q9ZHC7) (824 aa) fasta scores: E(): 4.4e-125, 51.5% id in 833 aa, and to Rhizobium loti cation transporting P-type ATPase mlr5325 SWALL:Q98C24 (EMBL:AP003006) (839 aa) fasta scores: E(): 4.9e-128, 57.19% id in 778 aa.
  
 
 0.821
BPSL3378
Putative heavy metal resistance membrane ATPase; Similar to Pseudomonas putida CadA SWALL:Q93TP6 (EMBL:AF333961) (737 aa) fasta scores: E(): 4e-100, 65.9% id in 745 aa, and to Ralstonia metallidurans Pb-efflux ATPase PbrA SWALL:Q9AKR5 (EMBL:AJ278984) (798 aa) fasta scores: E(): 1.1e-93, 66.94% id in 714 aa, and to Staphylococcus aureus probable cadmium-transporting ATPase CadA SWALL:CADD_STAAU (SWALL:P37386) (804 aa) fasta scores: E(): 2.8e-88, 40.3% id in 722 aa. CDS is extended at the N-terminus in comparison to orthologues.
  
 
 0.821
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.585
BPSS2136
Family S43 non-peptidase homologue; Similar to Pseudomonas aeruginosa porin D precursor OprD or pa0958 SWALL:PORD_PSEAE (SWALL:P32722) (443 aa) fasta scores: E(): 2.2e-32, 35.58% id in 444 aa, and to Pseudomonas aeruginosa probable porin pa4501 SWALL:Q9HVS0 (EMBL:AE004864) (484 aa) fasta scores: E(): 2.8e-43, 33.66% id in 505 aa.
  
     0.494
BPSS0351
Putative copper-related MerR-family transcriptional regulator; Similar to Escherichia coli transcriptional regulator CueR or b0487 SWALL:CUER_ECOLI (SWALL:P77565) (135 aa) fasta scores: E(): 4.6e-18, 44.27% id in 131 aa, and to Rhizobium meliloti transcriptional regulator HmrR SWALL:HMRR_RHIME (SWALL:Q9X5X4) (147 aa) fasta scores: E(): 1.9e-30, 65.35% id in 127 aa.
 
  
 0.461
BPSS1981
Similar to Serratia marcescens hypothetical 10.1 kDa protein in bioA 5'region SWALL:YOHL_SERMA (SWALL:P55757) (91 aa) fasta scores: E(): 3.4e-14, 53.84% id in 91 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein YaiN or b0357 or c0466 SWALL:YAIN_ECOLI (SWALL:P55756) (91 aa) fasta scores: E(): 7.1e-10, 41.75% id in 91 aa.
  
  
 0.448
BPSS0841
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsp0396 or rs00824 SWALL:Q8XSS1 (EMBL:AL646078) (326 aa) fasta scores: E(): 4.5e-39, 38.19% id in 322 aa, and to Xanthomonas campestris hypothetical protein xcc1731 SWALL:Q8P9W4 (EMBL:AE012274) (330 aa) fasta scores: E(): 1.3e-29, 35.46% id in 313 aa. Possible alternative upstream translational start sites. CDS is extended at the C-terminus in comparison to some orthologues.
 
  
 0.432
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
 
 0.422
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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